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生物資訊學、基因體學、轉錄體學、藥物標的探勘、分子譜系學

中國醫藥大學附設醫院 大數據中心 助理研究員

德國布倫瑞克工業大學博士
國立陽明大學(現國立陽明交通大學)生物醫學資訊研究所碩士
國立陽明大學(現國立陽明交通大學)生命科學系暨基因體科學研究所學士

德國Evotec International GmbH 副研究員
中央研究院生物多樣性研究中心 研究助理

Journal papers
1. Hu, K. et al. Assessing computational predictions of antimicrobial resistance phenotypes from microbial genomes. Briefings in bioinformatics 25, bbae206 (2024)
2. Lahnemann, D. et al. Eleven grand challenges in single-cell data science. Genome Biology 21, 31 (2020).
3. Khaledi*, A. et al. Predicting antimicrobial resistance in Pseudomonas aeruginosa with machine learning-enabled molecular diagnostics. EMBO Molecular Medicine 12, e10264 (2020).
4. Consortium, I. H. G. Comparative genomics of the major parasitic worms. Nature genetics 51, 163 (2019).
5. Chung, C.-L. et al. Comparative and population genomic landscape of Phellinus noxius: A hypervariable fungus causing root rot in trees. Molecular ecology 26, 6301–6316 (2017).
6. Wu*, G.-L., Kuo*, T.-H., Tsay, T.-T., Tsai, I. J. & Chen, P. J. Glycoside hydrolase (GH) 45 and 5 candidate cellulases in Aphelenchoides besseyi isolated from Bird’s-nest fern. PloS one 11, e0158663 (2016).
7. Kuo, T.-H. & Li, K.-B. Predicting protein–protein interaction sites using sequence descriptors and site propensity of neighboring amino acids. International journal of molecular sciences 17, 1788 (2016).
Book
1. Kuo, T.-H. Computational Methods for Reproducible Genotyping and Composite Datatype Tree Inference with Bacterial Sequence Data. (2023).